euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

38 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip351 chr1 41502709 41502709 + unknown germline . no 65 LOC100507178;SCMH1
srip3181 chr1 105028216 105028216 + unknown germline . no 65 .
srip6093 chr1 193778291 193778291 - unknown germline . no 65 .
srip14609 chr11 48360716 48360716 - unknown germline validated no 65 .
srip15319 chr11 58171837 58171837 + unknown germline . no 65 .
srip18004 chr11 110377870 110377870 - unknown germline . no 65 .
srip19077 chr11 134305630 134305630 - unknown germline validated no 65 .
srip20455 chr12 25775838 25775838 - unknown germline . no 65 IFLTD1
srip26035 chr12 118186926 118186926 + unknown germline . no 65 KSR2
srip26340 chr12 126802928 126802928 - unknown germline . no 65 .
srip26872 chr13 22489789 22489789 + unknown germline . no 65 .
srip28944 chr13 61462331 61462331 - unknown germline validated no 65 .
srip29519 chr13 61734484 61734484 . unknown germline validated no 65 .
srip31507 chr13 85871603 85871603 - unknown germline . no 65 .
srip37941 chr14 68784228 68784228 + unknown germline validated no 65 RAD51B
srip40925 chr15 53956103 53956103 . unknown germline validated no 65 WDR72
srip62112 chr2 221503749 221503749 . unknown germline validated no 65 .
srip64471 chr20 29638569 29638569 . unknown germline validated no 65 .
srip72550 chr3 55788565 55788565 + unknown germline . no 65 ERC2
srip73319 chr3 59852887 59852887 + unknown germline . no 65 FHIT
srip76018 chr3 95654406 95654406 + unknown germline . no 65 .
srip76117 chr3 98775487 98775487 - unknown germline . no 65 .
srip83215 chr4 18194343 18194343 - unknown germline validated no 65 .
srip108255 chr6 45325833 45325833 + unknown germline . no 65 RUNX2;SUPT3H
srip110071 chr6 69198728 69198728 . unknown germline validated no 65 .
srip110660 chr6 77379921 77379921 - unknown germline . no 65 .
srip111137 chr6 77980671 77980671 - unknown germline validated no 65 .
srip113238 chr6 123647637 123647637 . unknown germline . no 65 TRDN
srip115035 chr6 157968609 157968609 . unknown germline validated no 65 ZDHHC14
srip116755 chr7 30814160 30814160 - unknown germline . no 65 FAM188B;INMT-FAM188B
srip119914 chr7 84901725 84901725 - unknown germline validated no 65 .
srip121491 chr7 107829248 107829248 + unknown germline validated no 65 NRCAM
srip127422 chr8 72399225 72399225 - unknown germline . no 65 .
srip128130 chr8 85428606 85428606 + unknown germline . no 65 RALYL
srip129398 chr8 115881769 115881769 + unknown germline . no 65 .
srip129723 chr8 123098838 123098838 + unknown germline . no 65 .
srip135264 chr9 106602638 106602638 . unknown germline . no 65 .
srip136045 chr9 121394597 121394597 - unknown germline . no 65 .